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Search term: YPR133C


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name SPN1
SGD link S000006337
Alternative ID YPR133C
Description Protein that interacts with Spt6p and copurifies with Spt5p and RNA polymerase II, probable transcriptional elongation factor; metazoan homologs contain an acidic N terminus; mutations in the gene confer an Spt- phenotype
Synonyms YPR133C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1793 ACDHYPE

KOGs classification KOGs description
POORLY CHARACTERIZED Uncharacterized conserved protein

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g32130 GI:15222574
Arabidopsis thaliana (Ath) At4g19000 GI:15234085
Caenorhabditis elegans (Cel) CE05599
(WBGene00008729)
GI:17539794 Q19375
Drosophila melanogaster (Dme) 7293204 GI:7293204
Homo sapiens (Hsa) Hs22043544 GI:22043544
Saccharomyces cerevisiae (Sce) YPR133c
(S000006337)
GI:6325390 Q06505
Schizosaccharomyces pombe (Spo) SPBC19G7.16 GI:19112774 O42964
Encephalitozoon cuniculi (Ecu) ECU08g0440 GI:19173370 Q8SUS7


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt1g32130
At4g19000
GO:0005634 nucleus C
IDA
SpoSPBC19G7.16
GO:0005730 nucleolus C
IDA
SpoSPBC19G7.16
GO:0005819 spindle C
IDA
SpoSPBC19G7.16
GO:0008023 transcription elongation factor
complex
C
IPI
SceS000006337
ISS
SpoSPBC19G7.16
GO:0003674 molecular_function F
ND
AthAt4g19000
At1g32130
GO:0016944 RNA polymerase II transcription elongation factor
activity
F
IPI
SceS000006337
ISS
SpoSPBC19G7.16
GO:0000003 reproduction P
IMP
CelWBGene00008729
GO:0006368 RNA elongation from RNA polymerase II
promoter
P
IPI
SceS000006337
ISS
SpoSPBC19G7.16
GO:0008150 biological_process P
ND
AthAt4g19000
GO:0009742 brassinosteroid mediated signaling
pathway
P
IMP
AthAt1g32130
GO:0032784 regulation of RNA elongation P
ISS
SpoSPBC19G7.16
TAS
AthAt1g32130
GO:0040011 locomotion P
IMP
CelWBGene00008729

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
101656

Species Gene ID NCBI link UniProt link
Schizosaccharomyces pombe (Spo) iws1
(SPBC19G7.16)
GI:19112774 O42964
Saccharomyces cerevisiae (Sce) SPN1
(S000006337)
GI:6325390 Q06505
Kluyveromyces lactis (Kla) KLLA0B11209g GI:50304157
Eremothecium gossypii (Ego) AGOS_AAR107W GI:45184930
Magnaporthe grisea (Mgr) MGG_09004 GI:39955417
Neurospora crassa (Ncr) NCU09203.1 GI:32422303


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPBC19G7.16
GO:0005730 nucleolus C
IDA
SpoSPBC19G7.16
GO:0005819 spindle C
IDA
SpoSPBC19G7.16
GO:0008023 transcription elongation factor
complex
C
IPI
SceS000006337
ISS
SpoSPBC19G7.16
GO:0016944 RNA polymerase II transcription elongation factor
activity
F
IPI
SceS000006337
ISS
SpoSPBC19G7.16
GO:0006368 RNA elongation from RNA polymerase II
promoter
P
IPI
SceS000006337
ISS
SpoSPBC19G7.16
GO:0032784 regulation of RNA elongation P
ISS
SpoSPBC19G7.16

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_1940

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Anopheles gambiae (Aga) aga15015 ENSANGP00000010073
Ashbya gossypii (Ago) ago293 AAR107W
Arabidopsis thaliana (Ath) ath3359 At1g32130.1
Arabidopsis thaliana (Ath) ath19781 At4g19000.1
Caenorhabditis elegans (Cel) cel6143 F13B12.1
(CE05599;
WBGene00008729)
Candida glabrata (Cgl) cgl866 CAGL0D04818g
Cryptococcus neoformans (Cne) cne5633 179.m00495
Dictyostelium discoideum (Ddi) ddi3046 DDB0167879
Debaryomyces hansenii (Dha) dha3634 DEHA0E08877g
Drosophila melanogaster (Dme) dme18144 CG9915-PA
(FBgn0030738)
Danio rerio (Dre) dre24231 ENSDARP00000019473
Encephalitozoon cuniculi (Ecu) ecu201 19173370
Takifugu rubripes (Fru) fru26359 SINFRUP00000127083
Takifugu rubripes (Fru) fru14496 SINFRUP00000127607
Gallus gallus (Gga) gga23073 ENSGALP00000002782
(IWS1)
Gallus gallus (Gga) gga23074 ENSGALP00000002783
Homo sapiens (Hsa) hsa18556 ENSP00000295321
(IWS1)
Q96ST2-1
Kluyveromyces lactis (Kla) kla1026 KLLA0B11209g
Mus musculus (Mmu) mmu12453 ENSMUSP00000025243
(MGI:1920723)
Q8C1D8-1
Neurospora crassa (Ncr) ncr8970 NCU09203.2
Oryza sativa (Osa) osa8771 2684.m00168
Oryza sativa (Osa) osa10805 2784.m00135
Plasmodium falciparum (Pfa) pfa1041 PF11_0093
Rattus norvegicus (Rno) rno13900 ENSRNOP00000020142
(RGD:1304762)
Saccharomyces cerevisiae (Sce) sce6589 YPR133C
(S000006337)
Schizosaccharomyces pombe (Spo) spo3828 SPBC19G7.16 O42964
Yarrowia lipolytica (Yli) yli716 YALI0A20724g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt1g32130
At4g19000
MmuMGI:1920723
GO:0005634 nucleus C
IDA
SpoSPBC19G7.16
GO:0005730 nucleolus C
IDA
SpoSPBC19G7.16
GO:0005819 spindle C
IDA
SpoSPBC19G7.16
GO:0008023 transcription elongation factor
complex
C
IPI
SceS000006337
ISS
SpoSPBC19G7.16
GO:0003674 molecular_function F
ND
AthAt4g19000
At1g32130
MmuMGI:1920723
GO:0016944 RNA polymerase II transcription elongation factor
activity
F
IPI
SceS000006337
ISS
SpoSPBC19G7.16
GO:0000003 reproduction P
IMP
CelWBGene00008729
GO:0006368 RNA elongation from RNA polymerase II
promoter
P
IPI
SceS000006337
ISS
SpoSPBC19G7.16
GO:0008150 biological_process P
ND
AthAt4g19000
MmuMGI:1920723
GO:0009742 brassinosteroid mediated signaling
pathway
P
IMP
AthAt1g32130
GO:0032784 regulation of RNA elongation P
ISS
SpoSPBC19G7.16
TAS
AthAt1g32130
GO:0040011 locomotion P
IMP
CelWBGene00008729

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Curated yeast ortholog results:

S. pombe
systematic ID
S. cerevisiae
systematic ID
SPBC19G7.16
(O42964)
YPR133C
(S000006337)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPBC19G7.16
GO:0005730 nucleolus C
IDA
SpoSPBC19G7.16
GO:0005819 spindle C
IDA
SpoSPBC19G7.16
GO:0008023 transcription elongation factor
complex
C
IPI
SceS000006337
ISS
SpoSPBC19G7.16
GO:0016944 RNA polymerase II transcription elongation factor
activity
F
IPI
SceS000006337
ISS
SpoSPBC19G7.16
GO:0006368 RNA elongation from RNA polymerase II
promoter
P
IPI
SceS000006337
ISS
SpoSPBC19G7.16
GO:0032784 regulation of RNA elongation P
ISS
SpoSPBC19G7.16

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Query species:

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Search for GO info:  

GO info in one table:

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