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Search term: YPR169W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name JIP5
SGD link S000006373
Alternative ID YPR169W
Description Essential protein of unknown function; interacts with proteins involved in RNA processing, ribosome biogenesis, ubiquitination and demethylation; tagged protein localizes to nucleus and nucleolus; similar to WDR55, a human WD repeat protein
Synonyms YPR169W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG2444 ACDHYP-

KOGs classification KOGs description
POORLY CHARACTERIZED WD40 repeat protein

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At2g34260 GI:7485460
Caenorhabditis elegans (Cel) CE16634
(WBGene00012858)		 GI:17555894 O45938
Drosophila melanogaster (Dme) 7299504 GI:7299504
Homo sapiens (Hsa) Hs8923185 GI:8923185
Saccharomyces cerevisiae (Sce) YPR169w
(S000006373)		 GI:6325427
Schizosaccharomyces pombe (Spo) SPAC1A6.02 GI:19114105 O13856


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000006373
ISS
SpoSPAC1A6.02
GO:0005730 nucleolus C
IDA
SceS000006373
SpoSPAC1A6.02
ISS
SpoSPAC1A6.02
GO:0005834 heterotrimeric G-protein complex C
ISS
AthAt2g34260
GO:0043234 protein complex C
NAS
SpoSPAC1A6.02
GO:0080008 CUL4 RING ubiquitin ligase complex C
ISS
AthAt2g34260
GO:0000166 nucleotide binding F
ISS
AthAt2g34260
GO:0003674 molecular_function F
ND
SceS000006373
SpoSPAC1A6.02
GO:0000003 reproduction P
IMP
CelWBGene00012858
GO:0006898 receptor-mediated endocytosis P
IMP
CelWBGene00012858
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00012858
GO:0040035 hermaphrodite genitalia development P
IMP
CelWBGene00012858
GO:0042273 ribosomal large subunit biogenesis P
IMP
SceS000006373
GO:0042274 ribosomal small subunit biogenesis P
ISS
SpoSPAC1A6.02

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
40560

Species Gene ID NCBI link UniProt link
Schizosaccharomyces pombe (Spo) SPAC1A6.02 GI:67989905 O13856
Saccharomyces cerevisiae (Sce) JIP5
(S000006373)		 GI:83578109
Kluyveromyces lactis (Kla) KLLA0B10736g GI:50304115
Eremothecium gossypii (Ego) AGOS_AEL261C GI:45190346
Magnaporthe grisea (Mgr) MGG_08053 GI:145612045
Neurospora crassa (Ncr) NCU06021.1 GI:32410791


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000006373
ISS
SpoSPAC1A6.02
GO:0005730 nucleolus C
IDA
SceS000006373
SpoSPAC1A6.02
ISS
SpoSPAC1A6.02
GO:0043234 protein complex C
NAS
SpoSPAC1A6.02
GO:0003674 molecular_function F
ND
SceS000006373
SpoSPAC1A6.02
GO:0042273 ribosomal large subunit biogenesis P
IMP
SceS000006373
GO:0042274 ribosomal small subunit biogenesis P
ISS
SpoSPAC1A6.02

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_17659

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Ashbya gossypii (Ago) ago2245 AEL261C
Candida glabrata (Cgl) cgl2803 CAGL0I06490g
Debaryomyces hansenii (Dha) dha1157 DEHA0B11022g
Kluyveromyces lactis (Kla) kla1005 KLLA0B10736g
Neurospora crassa (Ncr) ncr5851 NCU06021.2
Saccharomyces cerevisiae (Sce) sce6635 YPR169W
(S000006373)
Yarrowia lipolytica (Yli) yli5575 YALI0F05588g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000006373
GO:0005730 nucleolus C
IDA
SceS000006373
GO:0003674 molecular_function F
ND
SceS000006373
GO:0042273 ribosomal large subunit biogenesis P
IMP
SceS000006373

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPAC1A6.02
(O13856)		 YPR169W
(S000006373)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000006373
ISS
SpoSPAC1A6.02
GO:0005730 nucleolus C
IDA
SceS000006373
SpoSPAC1A6.02
ISS
SpoSPAC1A6.02
GO:0043234 protein complex C
NAS
SpoSPAC1A6.02
GO:0003674 molecular_function F
ND
SceS000006373
SpoSPAC1A6.02
GO:0042273 ribosomal large subunit biogenesis P
IMP
SceS000006373
GO:0042274 ribosomal small subunit biogenesis P
ISS
SpoSPAC1A6.02

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