YOGY Home YOGY Help

Search term: YPR176C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name BET2
SGD link S000006380
Alternative ID YPR176C
Description Beta subunit of Type II geranylgeranyltransferase required for vesicular transport between the endoplasmic reticulum and the Golgi; provides a membrane attachment moiety to Rab-like proteins Ypt1p and Sec4p
Synonyms YPR176C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG0366 ACDHYPE

KOGs classification KOGs description
CELLULAR PROCESSES AND SIGNALING Protein geranylgeranyltransferase type II, beta subunit

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At3g12070 GI:15229948
Arabidopsis thaliana (Ath) At5g12210 GI:9759388
Caenorhabditis elegans (Cel) CE24762
(WBGene00015099)		 GI:17551754 P41992
Drosophila melanogaster (Dme) 7295883
(betaggt-II)		 GI:17864566
Homo sapiens (Hsa) Hs21359854 GI:2506788 P53611
Homo sapiens (Hsa) HsM4759018 GI:4759018
Saccharomyces cerevisiae (Sce) YPR176c
(S000006380)		 GI:6325434 P20133
Schizosaccharomyces pombe (Spo) SPAC167.02 GI:19114295 P46960
Encephalitozoon cuniculi (Ecu) ECU08g1290 GI:19173456 Q8SRA3
Arabidopsis thaliana (Ath) At3g12070 GI:15229948
Arabidopsis thaliana (Ath) At5g12210 GI:9759388
Caenorhabditis elegans (Cel) CE24762
(WBGene00015099)		 GI:17551754 P41992
Drosophila melanogaster (Dme) 7295883
(betaggt-II)		 GI:17864566
Homo sapiens (Hsa) Hs21359854 GI:2506788 P53611
Homo sapiens (Hsa) HsM4759018 GI:4759018
Saccharomyces cerevisiae (Sce) YPR176c
(S000006380)		 GI:6325434 P20133
Schizosaccharomyces pombe (Spo) SPAC167.02 GI:19114295 P46960
Encephalitozoon cuniculi (Ecu) ECU08g1290 GI:19173456 Q8SRA3
Arabidopsis thaliana (Ath) At3g12070 GI:15229948
Arabidopsis thaliana (Ath) At5g12210 GI:9759388
Caenorhabditis elegans (Cel) CE24762
(WBGene00015099)		 GI:17551754 P41992
Drosophila melanogaster (Dme) 7295883
(betaggt-II)		 GI:17864566
Homo sapiens (Hsa) Hs21359854 GI:2506788 P53611
Homo sapiens (Hsa) HsM4759018 GI:4759018
Saccharomyces cerevisiae (Sce) YPR176c
(S000006380)		 GI:6325434 P20133
Schizosaccharomyces pombe (Spo) SPAC167.02 GI:19114295 P46960
Encephalitozoon cuniculi (Ecu) ECU08g1290 GI:19173456 Q8SRA3


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPAC167.02
GO:0005829 cytosol C
IDA
SpoSPAC167.02
GO:0005968 Rab-protein geranylgeranyltransferase
complex		 C
IDA
SceS000006380
IPI
SceS000006380
ISS
SpoSPAC167.02
GO:0004662 CAAX-protein geranylgeranyltransferase
activity		 F
NAS
Dmebetaggt-II
GO:0004663 Rab geranylgeranyltransferase activity F
IDA
SceS000006380
ISS
SpoSPAC167.02
GO:0000003 reproduction P
IMP
CelWBGene00015099
GO:0006612 protein targeting to membrane P
IMP
SceS000006380
GO:0006888 ER to Golgi vesicle-mediated transport P
IMP
SceS000006380
ISS
SpoSPAC167.02
GO:0008219 cell death P
IMP
CelWBGene00015099
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00015099
GO:0018348 protein amino acid geranylgeranylation P
IDA
SceS000006380
ISS
SpoSPAC167.02
GO:0070317 negative regulation of G0 to G1
transition		 P
IMP
SpoSPAC167.02

Back to the top

HomoloGene results:

HomoloGene cluster Phylogenetic pattern
3371

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) RABGGTB GI:21359854
Canis familiaris (Cfa) RABGGTB GI:73960159
Mus musculus (Mmu) Rabggtb
(MGI:99537)		 GI:6755264 A2RTE6
Rattus norvegicus (Rno) Rabggtb
(RGD:3530)		 GI:20177500 41418
Gallus gallus (Gga) RABGGTB GI:118094772
Drosophila melanogaster (Dme) betaggt-II GI:17864566
Caenorhabditis elegans (Cel) B0280.1
(CE24762;
WBGene00015099)		 GI:17551754 P41992
Schizosaccharomyces pombe (Spo) ptb1
(SPAC167.02)		 GI:19114295 P46960
Saccharomyces cerevisiae (Sce) BET2
(S000006380)		 GI:6325434 P20133
Kluyveromyces lactis (Kla) KLLA0E04719g GI:50308321
Eremothecium gossypii (Ego) AGOS_AEL268W GI:45190338
Magnaporthe grisea (Mgr) MGG_09304 GI:39958997
Neurospora crassa (Ncr) NCU07509.1 GI:32414631
Arabidopsis thaliana (Ath) AT5G12210 GI:18416806
Arabidopsis thaliana (Ath) AT3G12070 GI:15229948
Oryza sativa (Osa) Os08g0512300 GI:115477242
Plasmodium falciparum (Pfa) PFF0120w GI:86170434


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPAC167.02
GO:0005829 cytosol C
IDA
SpoSPAC167.02
GO:0005968 Rab-protein geranylgeranyltransferase
complex		 C
IDA
SceS000006380
IPI
SceS000006380
ISS
SpoSPAC167.02
GO:0004661 protein geranylgeranyltransferase
activity		 F
ISS
PfaPFF0120w
GO:0004662 CAAX-protein geranylgeranyltransferase
activity		 F
NAS
Dmebetaggt-II
GO:0004663 Rab geranylgeranyltransferase activity F
IDA
SceS000006380
ISO
MmuMGI:99537
ISS
SpoSPAC167.02
GO:0005515 protein binding F
IPI
HsaRABGGTB
GO:0000003 reproduction P
IMP
CelWBGene00015099
GO:0006464 protein modification process P
NAS
HsaRABGGTB
GO:0006612 protein targeting to membrane P
IMP
SceS000006380
GO:0006888 ER to Golgi vesicle-mediated transport P
IMP
SceS000006380
ISS
SpoSPAC167.02
GO:0007601 visual perception P
TAS
HsaRABGGTB
GO:0008219 cell death P
IMP
CelWBGene00015099
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00015099
GO:0018348 protein amino acid geranylgeranylation P
IDA
SceS000006380
ISO
MmuMGI:99537
ISS
PfaPFF0120w
SpoSPAC167.02
GO:0070317 negative regulation of G0 to G1
transition		 P
IMP
SpoSPAC167.02

Back to the top

OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_1291

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga3377 ENSANGP00000020381
Ashbya gossypii (Ago) ago2237 AEL268W
Arabidopsis thaliana (Ath) ath13338 At3g12070.1
Arabidopsis thaliana (Ath) ath13339 At3g12070.2
Arabidopsis thaliana (Ath) ath23437 At5g12210.1
Arabidopsis thaliana (Ath) ath23438 At5g12210.2
Caenorhabditis elegans (Cel) cel272 B0280.1a
(CE24762;
WBGene00015099)
Candida glabrata (Cgl) cgl2048 CAGL0G09823g
Cryptococcus neoformans (Cne) cne667 163.m03855
Dictyostelium discoideum (Ddi) ddi9027 DDB0188972
Dictyostelium discoideum (Ddi) ddi9769 DDB0219584
Debaryomyces hansenii (Dha) dha3398 DEHA0E03575g
Drosophila melanogaster (Dme) dme489 CG18627-PA
(FBgn0028970)
Danio rerio (Dre) dre2154 ENSDARP00000014327
Encephalitozoon cuniculi (Ecu) ecu287 19173456
Takifugu rubripes (Fru) fru13138 SINFRUP00000158725
Takifugu rubripes (Fru) fru13137 SINFRUP00000174966
Gallus gallus (Gga) gga23018 ENSGALP00000018551
Gallus gallus (Gga) gga23019 ENSGALP00000018552
(RABGGTB)
Homo sapiens (Hsa) hsa1370 ENSP00000317473
(RABGGTB)		 P53611
Kluyveromyces lactis (Kla) kla3161 KLLA0E04719g
Mus musculus (Mmu) mmu17734 ENSMUSP00000066260
(MGI:99537)		 Q9JIF6
Neurospora crassa (Ncr) ncr7310 NCU07509.2
Oryza sativa (Osa) osa19894 3509.m00217
Oryza sativa (Osa) osa19935 3509.m00259
Oryza sativa (Osa) osa24345 3796.m00241
Plasmodium falciparum (Pfa) pfa2989 PFF0120w
Rattus norvegicus (Rno) rno17198 ENSRNOP00000013372
(RGD:3530)
Rattus norvegicus (Rno) rno17197 ENSRNOP00000013660
(RGD:3530)
Saccharomyces cerevisiae (Sce) sce6645 YPR176C
(S000006380)
Schizosaccharomyces pombe (Spo) spo2535 SPAC167.02 P46960
Yarrowia lipolytica (Yli) yli5024 YALI0E28248g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPAC167.02
GO:0005829 cytosol C
IDA
SpoSPAC167.02
GO:0005968 Rab-protein geranylgeranyltransferase
complex		 C
IDA
SceS000006380
IPI
SceS000006380
ISS
SpoSPAC167.02
GO:0004661 protein geranylgeranyltransferase
activity		 F
ISS
PfaPFF0120w
GO:0004662 CAAX-protein geranylgeranyltransferase
activity		 F
NAS
DmeFBgn0028970
GO:0004663 Rab geranylgeranyltransferase activity F
IDA
SceS000006380
ISO
MmuMGI:99537
ISS
SpoSPAC167.02
GO:0000003 reproduction P
IMP
CelWBGene00015099
GO:0006612 protein targeting to membrane P
IMP
SceS000006380
GO:0006888 ER to Golgi vesicle-mediated transport P
IMP
SceS000006380
ISS
SpoSPAC167.02
GO:0008219 cell death P
IMP
CelWBGene00015099
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00015099
GO:0018348 protein amino acid geranylgeranylation P
IDA
SceS000006380
ISO
MmuMGI:99537
ISS
PfaPFF0120w
SpoSPAC167.02
GO:0070317 negative regulation of G0 to G1
transition		 P
IMP
SpoSPAC167.02

Back to the top

Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPAC167.02
(P46960)		 YPR176C
(S000006380)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPAC167.02
GO:0005829 cytosol C
IDA
SpoSPAC167.02
GO:0005968 Rab-protein geranylgeranyltransferase
complex		 C
IDA
SceS000006380
IPI
SceS000006380
ISS
SpoSPAC167.02
GO:0004663 Rab geranylgeranyltransferase activity F
IDA
SceS000006380
ISS
SpoSPAC167.02
GO:0006612 protein targeting to membrane P
IMP
SceS000006380
GO:0006888 ER to Golgi vesicle-mediated transport P
IMP
SceS000006380
ISS
SpoSPAC167.02
GO:0018348 protein amino acid geranylgeranylation P
IDA
SceS000006380
ISS
SpoSPAC167.02
GO:0070317 negative regulation of G0 to G1
transition		 P
IMP
SpoSPAC167.02

Back to the top
YOGY Home YOGY Help

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

s.khadayate@ucl.ac.uk