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Search term: YPR179C


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name HDA3
SGD link S000006383
Alternative ID YPR179C
Description Subunit of a possibly tetrameric trichostatin A-sensitive class II histone deacetylase complex that contains an Hda1p homodimer and an Hda2p-Hda3p heterodimer; required for the activity of the complex; has similarity to Hda2p
Synonyms YPR179C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
40563

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) HDA3
(S000006383)
GI:6325437
Kluyveromyces lactis (Kla) KLLA0E04763g GI:50308325
Eremothecium gossypii (Ego) AGOS_AEL270W GI:45190336


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000006383
GO:0070823 HDA1 complex C
IDA
SceS000006383
IPI
SceS000006383
GO:0003677 DNA binding F
IDA
SceS000006383
GO:0003682 chromatin binding F
IDA
SceS000006383
GO:0004407 histone deacetylase activity F
IDA
SceS000006383
GO:0000122 negative regulation of transcription from RNA
polymerase II promoter
P
IMP
SceS000006383
GO:0007059 chromosome segregation P
IMP
SceS000006383
GO:0010978 gene silencing involved in chronological cell
aging
P
IMP
SceS000006383
GO:0016575 histone deacetylation P
IDA
SceS000006383
IMP
SceS000006383
GO:0031047 gene silencing by RNA P
IMP
SceS000006383

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_20756

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Ashbya gossypii (Ago) ago2235 AEL270W
Candida glabrata (Cgl) cgl2050 CAGL0G09867g
Debaryomyces hansenii (Dha) dha3379 DEHA0E03069g
Kluyveromyces lactis (Kla) kla3163 KLLA0E04763g
Saccharomyces cerevisiae (Sce) sce6648 YPR179C
(S000006383)
Yarrowia lipolytica (Yli) yli5021 YALI0E28204g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000006383
GO:0070823 HDA1 complex C
IDA
SceS000006383
IPI
SceS000006383
GO:0003677 DNA binding F
IDA
SceS000006383
GO:0003682 chromatin binding F
IDA
SceS000006383
GO:0004407 histone deacetylase activity F
IDA
SceS000006383
GO:0000122 negative regulation of transcription from RNA
polymerase II promoter
P
IMP
SceS000006383
GO:0007059 chromosome segregation P
IMP
SceS000006383
GO:0010978 gene silencing involved in chronological cell
aging
P
IMP
SceS000006383
GO:0016575 histone deacetylation P
IDA
SceS000006383
IMP
SceS000006383
GO:0031047 gene silencing by RNA P
IMP
SceS000006383

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Curated yeast ortholog results:

S. pombe
systematic ID
S. cerevisiae
systematic ID
SPCC188.07
(Q10432)
YPR179C
(S000006383)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000781 chromosome, telomeric region C
IDA
SpoSPCC188.07
GO:0005634 nucleus C
IDA
SceS000006383
SpoSPCC188.07
GO:0005654 nucleoplasm C
IDA
SpoSPCC188.07
GO:0005816 spindle pole body C
IDA
SpoSPCC188.07
GO:0031933 telomeric heterochromatin C
IDA
SpoSPCC188.07
GO:0043234 protein complex C
NAS
SpoSPCC188.07
GO:0070188 Stn1-Ten1 complex C
IDA
SpoSPCC188.07
GO:0070823 HDA1 complex C
IDA
SceS000006383
IPI
SceS000006383
GO:0003677 DNA binding F
IDA
SceS000006383
GO:0003682 chromatin binding F
IDA
SceS000006383
GO:0004407 histone deacetylase activity F
IDA
SceS000006383
GO:0005515 protein binding F
IPI
SpoSPCC188.07
GO:0000122 negative regulation of transcription from RNA
polymerase II promoter
P
IMP
SceS000006383
GO:0000723 telomere maintenance P
IMP
SpoSPCC188.07
GO:0006348 chromatin silencing at telomere P
IMP
SpoSPCC188.07
GO:0007059 chromosome segregation P
IMP
SceS000006383
GO:0010978 gene silencing involved in chronological cell
aging
P
IMP
SceS000006383
GO:0016233 telomere capping P
IGI
SpoSPCC188.07
GO:0016575 histone deacetylation P
IDA
SceS000006383
IMP
SceS000006383
GO:0031047 gene silencing by RNA P
IMP
SceS000006383
GO:0032206 positive regulation of telomere
maintenance
P
IMP
SpoSPCC188.07
GO:0034613 cellular protein localization P
IGI
SpoSPCC188.07
GO:0045132 meiotic chromosome segregation P
IMP
SpoSPCC188.07
GO:0045141 meiotic telomere clustering P
IMP
SpoSPCC188.07
GO:0048239 negative regulation of DNA recombination at
telomere
P
IMP
SpoSPCC188.07

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