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Search term: YPR184W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name GDB1
SGD link S000006388
Alternative ID YPR184W
Description Glycogen debranching enzyme containing glucanotranferase and alpha-1,6-amyloglucosidase activities, required for glycogen degradation; phosphorylated in mitochondria
Synonyms YPR184W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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Query species:

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Search for GO info:  

GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG3625 -CDHY--

KOGs classification KOGs description
METABOLISM Alpha amylase

Species KOG link NCBI link UniProt link
Homo sapiens (Hsa) Hs4557283 GI:4557283
Homo sapiens (Hsa) Hs4557285 GI:4557285
Caenorhabditis elegans (Cel) CE18115
(WBGene00011050)		 GI:17535489 O62334
Drosophila melanogaster (Dme) 7291282 GI:7291282
Homo sapiens (Hsa) Hs4557275 GI:4557275
Saccharomyces cerevisiae (Sce) YPR184w
(S000006388)		 GI:6325442 Q06625


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005737 cytoplasm C
IDA
SceS000006388
GO:0005739 mitochondrion C
IDA
SceS000006388
GO:0004134 4-alpha-glucanotransferase activity F
IDA
SceS000006388
IMP
SceS000006388
GO:0004135 amylo-alpha-1,6-glucosidase activity F
IDA
SceS000006388
IMP
SceS000006388
GO:0005980 glycogen catabolic process P
IMP
SceS000006388
GO:0007039 vacuolar protein catabolic process P
RCA
SceS000006388
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00011050

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
536

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) AGL GI:116734857
Pan troglodytes (Ptr) AGL GI:55587602
Canis familiaris (Cfa) AGL GI:57088199
Mus musculus (Mmu) Agl
(MGI:1924809)		 GI:124486747 Q8CE68
Rattus norvegicus (Rno) Agl GI:109465430
Gallus gallus (Gga) AGL GI:118094283
Drosophila melanogaster (Dme) CG9485
(FBgn0034618)		 GI:45551136
Anopheles gambiae (Aga) AgaP_AGAP001200 GI:158302403
Caenorhabditis elegans (Cel) R06A4.8
(CE18115;
WBGene00011050)		 GI:17535489 O62334
Saccharomyces cerevisiae (Sce) GDB1
(S000006388)		 GI:6325442 Q06625
Eremothecium gossypii (Ego) AGOS_AEL276C GI:45190330
Magnaporthe grisea (Mgr) MGG_00063 GI:145611872
Neurospora crassa (Ncr) NCU00743.1 GI:32408885


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005625 soluble fraction C
ISO
MmuMGI:1924809
GO:0005634 nucleus C
IDA
MmuMGI:1924809
GO:0005737 cytoplasm C
IDA
HsaAGL
MmuMGI:1924809
SceS000006388
GO:0005739 mitochondrion C
IDA
SceS000006388
GO:0016234 inclusion body C
IDA
MmuMGI:1924809
GO:0016529 sarcoplasmic reticulum C
ISO
MmuMGI:1924809
GO:0043033 isoamylase complex C
TAS
HsaAGL
GO:0004133 glycogen debranching enzyme activity F
IDA
MmuMGI:1924809
TAS
HsaAGL
GO:0004134 4-alpha-glucanotransferase activity F
IDA
SceS000006388
IMP
SceS000006388
ISO
MmuMGI:1924809
ISS
DmeFBgn0034618
GO:0004135 amylo-alpha-1,6-glucosidase activity F
IDA
SceS000006388
IMP
SceS000006388
ISO
MmuMGI:1924809
ISS
DmeFBgn0034618
GO:0005515 protein binding F
IPI
HsaAGL
MmuMGI:1924809
GO:0005529 sugar binding F
ISO
MmuMGI:1924809
GO:0030247 polysaccharide binding F
IDA
MmuMGI:1924809
IMP
MmuMGI:1924809
GO:0031593 polyubiquitin binding F
IDA
MmuMGI:1924809
IMP
MmuMGI:1924809
GO:0005977 glycogen metabolic process P
IDA
MmuMGI:1924809
GO:0005980 glycogen catabolic process P
IMP
SceS000006388
ISO
MmuMGI:1924809
GO:0007039 vacuolar protein catabolic process P
RCA
SceS000006388
GO:0007584 response to nutrient P
ISO
MmuMGI:1924809
GO:0009725 response to hormone stimulus P
ISO
MmuMGI:1924809
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00011050
GO:0051384 response to glucocorticoid stimulus P
ISO
MmuMGI:1924809

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_1726

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga3273 ENSANGP00000013922
Ashbya gossypii (Ago) ago2229 AEL276C
Caenorhabditis elegans (Cel) cel13416 R06A4.8
(CE18115;
WBGene00011050)
Candida glabrata (Cgl) cgl2055 CAGL0G09977g
Cryptococcus neoformans (Cne) cne4039 185.m02662
Dictyostelium discoideum (Ddi) ddi7256 DDB0219237
Debaryomyces hansenii (Dha) dha1768 DEHA0C07689g
Drosophila melanogaster (Dme) dme6329 CG9485-PA
(FBgn0034618)
Drosophila melanogaster (Dme) dme6330 CG9485-PB
(FBgn0034618)
Drosophila melanogaster (Dme) dme6331 CG9485-PC
(FBgn0034618)
Danio rerio (Dre) dre30077 ENSDARP00000006424
(LOC567798)
Danio rerio (Dre) dre30076 ENSDARP00000009576
(cav1)		 Q6YLH8
Danio rerio (Dre) dre8563 ENSDARP00000037496
Takifugu rubripes (Fru) fru25094 SINFRUP00000160156
Takifugu rubripes (Fru) fru25092 SINFRUP00000160157
Takifugu rubripes (Fru) fru25093 SINFRUP00000165971
Takifugu rubripes (Fru) fru25095 SINFRUP00000177372
Gallus gallus (Gga) gga22433 ENSGALP00000008668
Gallus gallus (Gga) gga22434 ENSGALP00000008669
(AGL)
Gallus gallus (Gga) gga22435 ENSGALP00000008670
Homo sapiens (Hsa) hsa1553 ENSP00000294724
(AGL)		 P35573-1
Homo sapiens (Hsa) hsa1551 ENSP00000309020
(AGL)
Homo sapiens (Hsa) hsa1555 ENSP00000354635
(AGL)		 P35573-2
Homo sapiens (Hsa) hsa1554 ENSP00000354971
(AGL)		 P35573-3
Homo sapiens (Hsa) hsa1552 ENSP00000355106
(AGL)		 P35573-1
Kluyveromyces lactis (Kla) kla683 KLLA0B03399g
Kluyveromyces lactis (Kla) kla684 KLLA0B03410g
Mus musculus (Mmu) mmu17461 ENSMUSP00000044012
(MGI:1924809)		 Q8CE68
Neurospora crassa (Ncr) ncr721 NCU00743.2
Rattus norvegicus (Rno) rno16921 ENSRNOP00000021786
Saccharomyces cerevisiae (Sce) sce6653 YPR184W
(S000006388)
Yarrowia lipolytica (Yli) yli640 YALI0A19074g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005625 soluble fraction C
ISO
MmuMGI:1924809
GO:0005634 nucleus C
IDA
MmuMGI:1924809
GO:0005737 cytoplasm C
IDA
MmuMGI:1924809
SceS000006388
GO:0005739 mitochondrion C
IDA
SceS000006388
GO:0016234 inclusion body C
IDA
MmuMGI:1924809
GO:0016529 sarcoplasmic reticulum C
ISO
MmuMGI:1924809
GO:0004133 glycogen debranching enzyme activity F
IDA
MmuMGI:1924809
GO:0004134 4-alpha-glucanotransferase activity F
IDA
SceS000006388
IMP
SceS000006388
ISO
MmuMGI:1924809
ISS
DmeFBgn0034618
GO:0004135 amylo-alpha-1,6-glucosidase activity F
IDA
SceS000006388
IMP
SceS000006388
ISO
MmuMGI:1924809
ISS
DmeFBgn0034618
GO:0005515 protein binding F
IPI
MmuMGI:1924809
GO:0005529 sugar binding F
ISO
MmuMGI:1924809
GO:0030247 polysaccharide binding F
IDA
MmuMGI:1924809
IMP
MmuMGI:1924809
GO:0031593 polyubiquitin binding F
IDA
MmuMGI:1924809
IMP
MmuMGI:1924809
GO:0005977 glycogen metabolic process P
IDA
MmuMGI:1924809
GO:0005980 glycogen catabolic process P
IMP
SceS000006388
ISO
MmuMGI:1924809
GO:0007039 vacuolar protein catabolic process P
RCA
SceS000006388
GO:0007584 response to nutrient P
ISO
MmuMGI:1924809
GO:0009725 response to hormone stimulus P
ISO
MmuMGI:1924809
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00011050
GO:0051384 response to glucocorticoid stimulus P
ISO
MmuMGI:1924809

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GO info in one table:

s.khadayate@ucl.ac.uk