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Search term: YPR185W


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name ATG13
SGD link S000006389
Alternative ID YPR185W
Description Regulatory subunit of the Atg1p signaling complex; stimulates Atg1p kinase activity; required for vesicle formation during autophagy and the cytoplasm-to-vacuole targeting (Cvt) pathway; involved in Atg9p, Atg23p, and Atg27p cycling
Synonyms YPR185W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG4573 A---YP-

KOGs classification KOGs description
CELLULAR PROCESSES AND SIGNALING Phosphoprotein involved in cytoplasm to vacuole targeting and autophagy

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At3g18770 GI:15230187
Arabidopsis thaliana (Ath) At3g49590 GI:15229172
Saccharomyces cerevisiae (Sce) YPR185w
(S000006389)
GI:6325443 Q06628
Schizosaccharomyces pombe (Spo) SPAC4F10.07c GI:19115662 O36019


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt3g49590
GO:0005737 cytoplasm C
IDA
SpoSPAC4F10.07c
GO:0005829 cytosol C
IDA
SpoSPAC4F10.07c
GO:0019898 extrinsic to membrane C
IDA
SceS000006389
GO:0034273 Atg1p signaling complex C
IPI
SceS000006389
GO:0003674 molecular_function F
ND
AthAt3g49590
SpoSPAC4F10.07c
GO:0019887 protein kinase regulator activity F
IMP
SceS000006389
GO:0000422 mitochondrion degradation P
IMP
SceS000006389
GO:0000747 conjugation with cellular fusion P
IMP
SpoSPAC4F10.07c
GO:0006914 autophagy P
IMP
SpoSPAC4F10.07c
RCA
SceS000006389
GO:0006995 cellular response to nitrogen starvation P
IMP
SpoSPAC4F10.07c
GO:0008150 biological_process P
ND
AthAt3g49590
GO:0016236 macroautophagy P
IC
SpoSPAC4F10.07c
IMP
SceS000006389
GO:0030437 ascospore formation P
IMP
SpoSPAC4F10.07c
GO:0032147 activation of protein kinase activity P
IMP
SceS000006389
GO:0032258 CVT pathway P
IMP
SceS000006389
ISS
SpoSPAC4F10.07c
GO:0034727 piecemeal microautophagy of nucleus P
IMP
SceS000006389

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
117938

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) ATG13
(S000006389)
GI:6325443 Q06628
Kluyveromyces lactis (Kla) KLLA0B03432g GI:50303491
Eremothecium gossypii (Ego) AGOS_AEL277C GI:45190329


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0019898 extrinsic to membrane C
IDA
SceS000006389
GO:0034273 Atg1p signaling complex C
IPI
SceS000006389
GO:0019887 protein kinase regulator activity F
IMP
SceS000006389
GO:0000422 mitochondrion degradation P
IMP
SceS000006389
GO:0006914 autophagy P
RCA
SceS000006389
GO:0016236 macroautophagy P
IMP
SceS000006389
GO:0032147 activation of protein kinase activity P
IMP
SceS000006389
GO:0032258 CVT pathway P
IMP
SceS000006389
GO:0034727 piecemeal microautophagy of nucleus P
IMP
SceS000006389

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_13253

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Ashbya gossypii (Ago) ago2228 AEL277C
Candida glabrata (Cgl) cgl2056 CAGL0G09999g
Cryptococcus neoformans (Cne) cne2460 181.m08497
Debaryomyces hansenii (Dha) dha3665 DEHA0E09603g
Kluyveromyces lactis (Kla) kla685 KLLA0B03432g
Neurospora crassa (Ncr) ncr4701 NCU04840.2
Saccharomyces cerevisiae (Sce) sce6654 YPR185W
(S000006389)
Schizosaccharomyces pombe (Spo) spo4802 SPAC4F10.07c O36019
Yarrowia lipolytica (Yli) yli5483 YALI0F03432g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005737 cytoplasm C
IDA
SpoSPAC4F10.07c
GO:0005829 cytosol C
IDA
SpoSPAC4F10.07c
GO:0019898 extrinsic to membrane C
IDA
SceS000006389
GO:0034273 Atg1p signaling complex C
IPI
SceS000006389
GO:0003674 molecular_function F
ND
SpoSPAC4F10.07c
GO:0019887 protein kinase regulator activity F
IMP
SceS000006389
GO:0000422 mitochondrion degradation P
IMP
SceS000006389
GO:0000747 conjugation with cellular fusion P
IMP
SpoSPAC4F10.07c
GO:0006914 autophagy P
IMP
SpoSPAC4F10.07c
RCA
SceS000006389
GO:0006995 cellular response to nitrogen starvation P
IMP
SpoSPAC4F10.07c
GO:0016236 macroautophagy P
IC
SpoSPAC4F10.07c
IMP
SceS000006389
GO:0030437 ascospore formation P
IMP
SpoSPAC4F10.07c
GO:0032147 activation of protein kinase activity P
IMP
SceS000006389
GO:0032258 CVT pathway P
IMP
SceS000006389
ISS
SpoSPAC4F10.07c
GO:0034727 piecemeal microautophagy of nucleus P
IMP
SceS000006389

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Curated yeast ortholog results:

S. pombe
systematic ID
S. cerevisiae
systematic ID
SPAC4F10.07c
(O36019)
YPR185W
(S000006389)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005737 cytoplasm C
IDA
SpoSPAC4F10.07c
GO:0005829 cytosol C
IDA
SpoSPAC4F10.07c
GO:0019898 extrinsic to membrane C
IDA
SceS000006389
GO:0034273 Atg1p signaling complex C
IPI
SceS000006389
GO:0003674 molecular_function F
ND
SpoSPAC4F10.07c
GO:0019887 protein kinase regulator activity F
IMP
SceS000006389
GO:0000422 mitochondrion degradation P
IMP
SceS000006389
GO:0000747 conjugation with cellular fusion P
IMP
SpoSPAC4F10.07c
GO:0006914 autophagy P
IMP
SpoSPAC4F10.07c
RCA
SceS000006389
GO:0006995 cellular response to nitrogen starvation P
IMP
SpoSPAC4F10.07c
GO:0016236 macroautophagy P
IC
SpoSPAC4F10.07c
IMP
SceS000006389
GO:0030437 ascospore formation P
IMP
SpoSPAC4F10.07c
GO:0032147 activation of protein kinase activity P
IMP
SceS000006389
GO:0032258 CVT pathway P
IMP
SceS000006389
ISS
SpoSPAC4F10.07c
GO:0034727 piecemeal microautophagy of nucleus P
IMP
SceS000006389

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